CDS
| Accession Number | TCMCG005C17291 |
| gbkey | CDS |
| Protein Id | XP_020268606.1 |
| Location | complement(join(77679669..77679922,77681055..77681227,77681329..77682149,77682253..77682477,77683180..77683317,77683468..77683552,77683704..77683762,77685696..77685917,77686163..77686234,77686411..77686523,77687979..77688144,77688232..77688351,77690160..77690309,77690907..77690964,77706848..77706893,77707047..77707182,77707297..77707368)) |
| Gene | LOC109844010 |
| GeneID | 109844010 |
| Organism | Asparagus officinalis |
Protein
| Length | 969aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA376608; |
| db_source | XM_020413017.1 |
| Definition | protein RRC1-like isoform X2 |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | U2 snRNP-associated SURP motif-containing |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03041 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12842
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03040
[VIEW IN KEGG] map03040 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005654 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGAATTTCTCTATGACTCGAAAGAAGACCCCTTTCCAGAAACATCGAGAAGAGGAGGAGGCCAAGAAGAAGAGGGAGGAGGATGAAACTGCTCGATTGTATGCCGAGTTTGTGGAGTCCTTCCAAGGTAGCGAAGCACCTGGGTCCAAGGCTTTTGTTAGAGGAGGGATGATTGATCCAAATGAGAAGATGAAGACAAATTCAGAAGGTGGAAATTCCAAAGATGGGCCATCTGTTCCAAAGAAGGGAACTAGGTATGTGCCATCCTTTCTACCTCCACCTTCTAATAAAGGGACCGAGCCAGAGAAAAAGGATGATGAGAGGCCAAGGGAAAAGGAGAAAGGAAAACCACGTGCAATCGATAATTTCCTGGAAGAGCTGAAGCTTGAACAAGAGCTGAGGGAGAAGCGTAATCAAGAACGTGAGCAAAGACGCGAAGGGCGATATGGTGATAGTTCTGTGCCGCCTAGCCGTTTTGATGAATTGCCTGATGATTTTGATCCAAGTGGAAGACTTCTAGGATCATTTGACGATGGGGATCCCCAGACTACAAATTTGTATGTTGGGAATCTTTCACCACAGGTGGACGAAAATTTTCTATTAAGGACGTTTGGAAGGTTTGGTCCCATTGCTAGTGTGAAAATAATGTGGCCTCGAACAGAAGAAGAACGTAGGAGGCAAAGAAATTGTGGCTTTGTTGCATTCATGAACAGAGCTGATGGACAGGCTGCCAAGGATGAGATGCAAGGTGTAGTTGTGTATGATTATGAATTGAAGATTGGGTGGGGTAAGTCGGTATCACTTCCAGCGCAGGCTCTGCCTGCTCCCCCACCTGGGCACATGGCTATTAGAAACAAGGAGGGTAACACTGTGATTCTATCTGGCCCTGATGGGCCTCCAGTTACGTCTGTGACTAGTCAAAGTTCTGAGTTGGTTCTTACACCAAATGTTCCAGATATACTGGTTCTTCTTCCTGAAGATAAACACTTACAACATGTTATTGACACAATGGCCCTACACGTTCTGGATGGTGGATGTGCCTTTGAACAAGCTGTTATGGAGAGAGGCCGTGGAAATCCTCTTTTTAATTTCTTATTTGAGCTTGGATCCAAAGAACATACATACTATGTTTGGAGACTTTACTCCTTCGCCCAGGGTGACACACTTCAACGGTGGAGGACAGAGCCCTTTATCATGATAACTGGAAGTGGGAGATGGATTCCACCCTCTTTGCCGCCTACTCCAAGTCCAGAGCAAGAGAAAGAAGCTACCACCACGTATGCAGCTGGTAGAAGCAGGCGTGTGGAGTTGGAAAGAACACTAACAGATCCACAACGAGATGAATTTGAGGACATGTTGCGTGCGTTAACTTTGGAGAGGAGCCAAGTAAAACAAGCTATGGGTTTTGCTTTGGATAATGCTGATGCAGCTGGAGAGGTGGTTGAGGTTCTTACGGAATCGTTGACGCTTAAGGAAACGCCCATACCGACTAAGGTTGCAAGGCTAATGCTGGTTTCTGACATCCTGCATAACAGTAGTGCTCCAGTGAAAAATGCTTCTGCATATCGGACAAAATTTGAAGCTACTTTACCAGACATAATGGAGAGCTTCAATGACTTATATCGTAGTATTACAGGACGGATTACTGCCGAGGCCCTCAAGGAACGAGTTTTAAAGGTTCTTCAGGTATGGGCAGACTGGTTTCTTTTTTCTGATGCGTATGTCAATGGTTTGCGTGCTACTTTTCTCCGATCAGGGAACTCTGGTGTCACACCTTTCCATTCTATATGTGGAGATGCACCTGAAATTGAAAACAAAAGTAGTTCCGAAGATCTTCAAGAAGTGGACAAAATTAATCAAGATGCTGCACTGGCAATGGGGAAGGGAGCAGCTATGCAAGAGTTACTAAGTCTACCTCTTACTGAACTGGAAAGACGTTGCAGGCAAAATGGTCTCTCACTTCTTGGTGGTAGGGAAATGATGGTTGCAAGACTGCTGAATCTGGAGGAAGCAGAAAAGCAGAGGGGATATGATCGAGATGATGAGATGAGATATGTGCATAGCCATTCTGGCAATCATAGAACAGAGGATGACAGTTTGAAAGCGAATAATGCTGGTCACAGAGAAGCCAACCGTGGGATGGAACCAAGAAGCTCGAGTAAGTGGAGTCGACATGATGAAGAGGGACATGGGAATGTTTTTTCATCTTTAGCACCAACCCTTGCGATTCCTCAGCCTGAGTTAAGAGCATTCCCTAGCAAGAAAGAAAAATATGACCCTATTTTACCAGATTCTAAATGGTCTCGAGATGATGATGGCAGCGATGATGAAGAAAACCAAGGTGGTCGAGGTTTAGGCCTAAGTTATTCCTCCTCTGGAAGTGAAAATGCTGACGGTGATCTTGAGAAGGCGGAGGAGGCTGACATGGAAGCTGGCGCCAACAATCTTCCTTTTCCTGAGAGTAACATGAGTGAAGAGCACAGACAGAAACTCAGGCGTTTGGAGGTTGCTGTAATAGAATATCGTGAAACTCTTGAAGAGCGAGGAATTCGAAATCCAGAGGAAATAGAAAAGAAAGTTGCGAATCATCGGAGACGGCTTCAGTTAGAGCTTGGTTTACTAAATTCTGTGGAAGGCTCCAGTAGGCAATCATCTCAGAGGACACCAACAGTGAGGAAGGGCAAGCGTGAAGATGGGCATGAATCTTCAAGGAAGCGGCACCGAAGTCAGAGCAGAAGCCGCAGCCCACAAAAGAGGTCATCAACCAGAGACAGGGAGAGGGTGAGCGATGCTGATAGGAGTCAAGATAGACACCGTCAAAGAGAAAAGAGTGGAAGCAGAGAACGAGATGACCATGAAAGGGATAGAACTAGAGAAAGGGACAGAGATAGGAGAAGGAAGGGAAAATGA |
| Protein: MNFSMTRKKTPFQKHREEEEAKKKREEDETARLYAEFVESFQGSEAPGSKAFVRGGMIDPNEKMKTNSEGGNSKDGPSVPKKGTRYVPSFLPPPSNKGTEPEKKDDERPREKEKGKPRAIDNFLEELKLEQELREKRNQEREQRREGRYGDSSVPPSRFDELPDDFDPSGRLLGSFDDGDPQTTNLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDEMQGVVVYDYELKIGWGKSVSLPAQALPAPPPGHMAIRNKEGNTVILSGPDGPPVTSVTSQSSELVLTPNVPDILVLLPEDKHLQHVIDTMALHVLDGGCAFEQAVMERGRGNPLFNFLFELGSKEHTYYVWRLYSFAQGDTLQRWRTEPFIMITGSGRWIPPSLPPTPSPEQEKEATTTYAAGRSRRVELERTLTDPQRDEFEDMLRALTLERSQVKQAMGFALDNADAAGEVVEVLTESLTLKETPIPTKVARLMLVSDILHNSSAPVKNASAYRTKFEATLPDIMESFNDLYRSITGRITAEALKERVLKVLQVWADWFLFSDAYVNGLRATFLRSGNSGVTPFHSICGDAPEIENKSSSEDLQEVDKINQDAALAMGKGAAMQELLSLPLTELERRCRQNGLSLLGGREMMVARLLNLEEAEKQRGYDRDDEMRYVHSHSGNHRTEDDSLKANNAGHREANRGMEPRSSSKWSRHDEEGHGNVFSSLAPTLAIPQPELRAFPSKKEKYDPILPDSKWSRDDDGSDDEENQGGRGLGLSYSSSGSENADGDLEKAEEADMEAGANNLPFPESNMSEEHRQKLRRLEVAVIEYRETLEERGIRNPEEIEKKVANHRRRLQLELGLLNSVEGSSRQSSQRTPTVRKGKREDGHESSRKRHRSQSRSRSPQKRSSTRDRERVSDADRSQDRHRQREKSGSRERDDHERDRTRERDRDRRRKGK |